---
name: Salmon
url: http://combine-lab.github.io/salmon/
description: >
  Salmon is a tool for quantifying the expression of transcripts using RNA-seq data.
---

The Salmon module parses results generated by
[Salmon](http://combine-lab.github.io/salmon/),
a tool for quantifying the expression of transcripts using RNA-seq data.

The Salmon module parses `meta_info.json`, `lib_format_counts.json` and `flenDist.txt` files, if found.

:::note
Note that `meta_info.json` must be within a directory called either `aux_info` or `aux` and will be ignored otherwise.
:::
