Example tool

Usage: bali-phy [-c/--count N] FILE --mode MODE [-h/--help]

Process one file

Available options:
  -c/--count N            Number of passes (default: 1)
  FILE                    Input file
  --mode MODE             Processing mode
  -h/--help               Show this help text

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Missing: --name NAME

Usage: bali-phy outer inner --name NAME
