BALL::GeneralizedBornModel::GBParameters Class Reference

Inheritance diagram for BALL::GeneralizedBornModel::GBParameters:

Public Member Functions
	GBParameters ()
	~GBParameters ()
bool	extractSection (Parameters &parameters, const String &section_name)
const StringHashMap< float > &	getScalingFactors () const
float	getSoluteDC () const
float	getSolventDC () const
float	getKappa () const
Public Member Functions inherited from BALL::ParameterSection
	ParameterSection ()
	ParameterSection (const ParameterSection &parameter_section)
virtual	~ParameterSection ()
const String &	getSectionName () const
const String &	getValue (const String &key, const String &variable) const
bool	has (const String &key, const String &variable) const
bool	has (const String &key) const
bool	hasVariable (const String &variable) const
Position	getColumnIndex (const String &variable) const
Size	getNumberOfVariables () const
Size	getNumberOfKeys () const
const String &	getValue (Position key_index, Position variable_index) const
const String &	getKey (Position key_index) const
virtual void	clear ()
const ParameterSection &	operator= (const ParameterSection &section)
virtual bool	isValid () const
bool	operator== (const ParameterSection &parameter_section) const

Private Attributes
StringHashMap< float >	scaling_factors_
float	dc_solute_
float	dc_solvent_
float	lambda_
float	delta_
float	kappa_
float	rho_0_

Additional Inherited Members
Public Types inherited from BALL::ParameterSection
enum	{ MAX_FIELDS = 20 }
Public Attributes inherited from BALL::ParameterSection
Options	options
Static Public Attributes inherited from BALL::ParameterSection
static const String	UNDEFINED
Protected Attributes inherited from BALL::ParameterSection
String	section_name_
String	format_line_
StringHashMap< Index >	section_entries_
StringHashMap< Index >	variable_names_
std::vector< String >	entries_
std::vector< String >	keys_
Size	number_of_variables_
std::vector< float >	version_
bool	valid_

Detailed Description

Definition at line 173 of file generalizedBornCase.h.

Constructor & Destructor Documentation

BALL::GeneralizedBornModel::GBParameters::GBParameters

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)

BALL::GeneralizedBornModel::GBParameters::~GBParameters

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Member Function Documentation

bool BALL::GeneralizedBornModel::GBParameters::extractSection	(	Parameters &	parameters,
		const String &	section_name
	)

Reads a parameter section from an INI file. This method reads the section given in section_name from ini_file, interprets (if given) a format line, reads the data from this section according to the format, and builds some datastructures for fast and easy acces to the data.

Parameters

parameters	the parameters defining the inifile to be read from
section_name	the name of the section to be read (without the squared brackets)

Returns

bool - true if the section could be read, false otherwise

Reimplemented from BALL::ParameterSection.

float BALL::GeneralizedBornModel::GBParameters::getKappa

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)

const

const StringHashMap<float>& BALL::GeneralizedBornModel::GBParameters::getScalingFactors

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const

float BALL::GeneralizedBornModel::GBParameters::getSoluteDC

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const

float BALL::GeneralizedBornModel::GBParameters::getSolventDC

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)

const

Member Data Documentation

float BALL::GeneralizedBornModel::GBParameters::dc_solute_

private

Definition at line 199 of file generalizedBornCase.h.

float BALL::GeneralizedBornModel::GBParameters::dc_solvent_

private

Definition at line 203 of file generalizedBornCase.h.

float BALL::GeneralizedBornModel::GBParameters::delta_

private

Definition at line 211 of file generalizedBornCase.h.

float BALL::GeneralizedBornModel::GBParameters::kappa_

private

Definition at line 215 of file generalizedBornCase.h.

float BALL::GeneralizedBornModel::GBParameters::lambda_

private

Definition at line 207 of file generalizedBornCase.h.

float BALL::GeneralizedBornModel::GBParameters::rho_0_

private

Definition at line 219 of file generalizedBornCase.h.

StringHashMap<float> BALL::GeneralizedBornModel::GBParameters::scaling_factors_

private

Definition at line 195 of file generalizedBornCase.h.