BALL::VIEW::HBondModelProcessor Class Reference

#include <BALL/VIEW/MODELS/HBondModel.h>

Inheritance diagram for BALL::VIEW::HBondModelProcessor:

Public Member Functions
Constructors and Destructors
	HBondModelProcessor ()
	HBondModelProcessor (const HBondModelProcessor &model)
virtual	~HBondModelProcessor ()
virtual void	clear ()
Assignment
void	set (const HBondModelProcessor &model)
const HBondModelProcessor &	operator= (const HBondModelProcessor &model)
Public Member Functions inherited from BALL::VIEW::AtomBondModelBaseProcessor
	AtomBondModelBaseProcessor ()
	AtomBondModelBaseProcessor (const AtomBondModelBaseProcessor &baseProcessor)
virtual	~AtomBondModelBaseProcessor ()
void	set (const AtomBondModelBaseProcessor &processor)
const AtomBondModelBaseProcessor &	operator= (const AtomBondModelBaseProcessor &processor)
virtual void	dump (std::ostream &s=std::cout, Size depth=0) const
virtual void	clearComposites ()
virtual bool	createGeometricObjects ()
Public Member Functions inherited from BALL::VIEW::ModelProcessor
	ModelProcessor ()
	ModelProcessor (const ModelProcessor &model_processor)
virtual	~ModelProcessor ()
virtual bool	isValid () const
GeometricObjectList &	getGeometricObjects ()
	Return the list with the created geometric objects.
const GeometricObjectList &	getGeometricObjects () const
	Return the list with the created geometric objects.
void	setDrawingPrecision (Index precision)
Index	getDrawingPrecision () const
void	setSurfaceDrawingPrecision (float precision)
float	getSurfaceDrawingPrecision () const
Public Member Functions inherited from BALL::UnaryProcessor< Composite >
	UnaryProcessor ()
	UnaryProcessor (const UnaryProcessor &)
virtual	~UnaryProcessor ()
virtual bool	start ()
virtual bool	finish ()
Public Member Functions inherited from BALL::PropertyManager
BALL_INLINE	PropertyManager ()
	Default constructor.
BALL_INLINE	PropertyManager (const PropertyManager &property_manager)
	Copy constructor.
virtual	~PropertyManager ()
	Destructor.
virtual void	destroy ()
	Clears all properties.
void	set (const PropertyManager &property_manager)
const PropertyManager &	operator= (const PropertyManager &property_manager)
void	get (PropertyManager &property_manager) const
void	swap (PropertyManager &property_manager)
BitVector &	getBitVector ()
const BitVector &	getBitVector () const
	operator BitVector & ()
void	setProperty (Property property)
void	clearProperty (Property property)
void	toggleProperty (Property property)
Size	countProperties () const
const NamedProperty &	getNamedProperty (Position index) const
NamedProperty &	getNamedProperty (Position index)
void	setProperty (const NamedProperty &property)
void	setProperty (const string &name)
void	setProperty (const string &name, bool value)
void	setProperty (const string &name, int value)
void	setProperty (const string &name, unsigned int value)
void	setProperty (const string &name, float value)
void	setProperty (const string &name, double value)
void	setProperty (const string &name, const string &value)
void	setProperty (const string &name, const PersistentObject &value)
const NamedProperty &	getProperty (const string &name) const
NamedPropertyIterator	beginNamedProperty ()
NamedPropertyIterator	endNamedProperty ()
void	clearProperty (const string &name)
Size	countNamedProperties () const
bool	hasProperty (Property property) const
	Query for an unnamed property.
bool	hasProperty (const string &name) const
	Query for a named property.
bool	operator== (const PropertyManager &pm) const
bool	operator!= (const PropertyManager &pm) const
	Inequality operator.
void	write (PersistenceManager &pm) const
	Persistent stream writing.
bool	read (PersistenceManager &pm)
	Persistent stream reading.

Processor specific methods
float	radius_
virtual Processor::Result	operator() (Composite &composite)
void	setRadius (float radius)
float	getRadius () const

Additional Inherited Members
Public Types inherited from BALL::UnaryFunctor< Composite, Processor::Result >
typedef Processor::Result	result_type
typedef Composite	argument_type
typedef Composite &	argument_reference
typedef const Composite &	const_argument_reference
typedef Composite *	argument_pointer
typedef const Composite *	const_argument_pointer
Protected Member Functions inherited from BALL::VIEW::AtomBondModelBaseProcessor
virtual void	visualiseBond_ (const Bond &bond)
virtual void	visualiseRings_ ()
void	insertAtom_ (const Atom *atom)
void	clearUsedAtoms_ ()
std::list< const Atom * > &	getAtomList_ ()
HashSet< const Atom * > &	getAtomSet_ ()
void	buildBondModels_ ()
Protected Attributes inherited from BALL::VIEW::AtomBondModelBaseProcessor
vector< vector< Atom * > >	rings_
HashSet< const Atom * >	ring_atoms_

Detailed Description

HBondModelProcessor class.

Definition at line 23 of file HBondModel.h.

Constructor & Destructor Documentation

BALL::VIEW::HBondModelProcessor::HBondModelProcessor

(

)

Default Constructor.

BALL::VIEW::HBondModelProcessor::HBondModelProcessor

(

const HBondModelProcessor &

model

)

Copy constructor.

virtual BALL::VIEW::HBondModelProcessor::~HBondModelProcessor ( )

virtual

Destructor.

Member Function Documentation

virtual void BALL::VIEW::HBondModelProcessor::clear ( )

virtual

Explicit default initialization. Calls AtomBondModelBaseProcessor::clear.

Reimplemented from BALL::VIEW::AtomBondModelBaseProcessor.

float BALL::VIEW::HBondModelProcessor::getRadius ( ) const

inline

Definition at line 84 of file HBondModel.h.

virtual Processor::Result BALL::VIEW::HBondModelProcessor::operator() ( Composite &  composite )

virtual

Operator method. This method iterates over each Composite object reachable in the Composite tree. If the composite is of kind Atom than a Sphere is created for that atom, and the atom is inserted with the method insertAtom_().

Reimplemented from BALL::VIEW::AtomBondModelBaseProcessor.

const HBondModelProcessor& BALL::VIEW::HBondModelProcessor::operator=

(

const HBondModelProcessor &

model

)

Assignment operator. Calls set().

Parameters

model

the HBondModelProcessor to be copied

void BALL::VIEW::HBondModelProcessor::set

(

const HBondModelProcessor &

model

)

Assignment. Calls AtomBondModelBaseProcessor::set.

void BALL::VIEW::HBondModelProcessor::setRadius ( float  radius )

inline

Definition at line 80 of file HBondModel.h.

Member Data Documentation

float BALL::VIEW::HBondModelProcessor::radius_

protected

Definition at line 89 of file HBondModel.h.